The detailed information of tRNA gene sequence


Sequence ID>WENV170019415
Genome IDBBPD01011493
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2148
End posion on genome 2222
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
ctttatttgt
tRNA gene sequence
GGGGCTGTAGCGCAGTGGGAGCGCGCTTCCTTGGCATGGAAGAGGTCACGGGTTCAAATC
CCGTCAGCTCCACCA
Downstream region at tRNA end position
ttctacagga
Secondary structure (Cloverleaf model)
>WENV170019415	Ala	GGC
                   t      ACCA ttctacagga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
        G A        A      | | | | |     A
      T     C G C G       A C G G G     C
      G     | | | |                 T T
      G     G C G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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