The detailed information of tRNA gene sequence


Sequence ID>WENV170019417
Genome IDBBPD01011568
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 947
End posion on genome 1037
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcgacagcc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTATACGGTTTCACCGT
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaacgccgtt
Secondary structure (Cloverleaf model)
>WENV170019417	Ser	CGA
                   c      GCCA aaacgccgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TATACGGTTTCACCGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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