The detailed information of tRNA gene sequence


Sequence ID>WENV170019419
Genome IDBBPD01011773
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2408
End posion on genome 2338
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
attagtgatt
tRNA gene sequence 
GCGGGTGTAGTTCAGTGGCAGAACGTCAGCCTTCCAAGCTGTTCATGTGGGTTCGATTCC
CACCATCCGCTtgt
Downstream region at tRNA end position 
tgggtagata
Secondary structure (Cloverleaf model)
>WENV170019419	Gly	TCC
                   t      Ttgt tgggtagata
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T T
                    T     C A C C C     A
        G A        A      | | | | |     G
      T     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        C A        G     TCAT
                    T   T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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