The detailed information of tRNA gene sequence


Sequence ID>WENV170019444
Genome IDBBPD01013168
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3878
End posion on genome 3973
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagttggcac
tRNA gene sequence 
GGAGAGGTGGCCGAGTAGGTCGAAGGCGGTCGCCTGCTAAGCGATTATACGAGCTTTAAA
CTCGTATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttttgcgc
Secondary structure (Cloverleaf model)
>WENV170019444	Ser	GCT
                   c      GCCA ttttttgcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G C G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACGAGCTTTAAACTCGTATC
                    G + T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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