The detailed information of tRNA gene sequence


Sequence ID>WENV170019458
Genome IDBBPD01013591
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7628
End posion on genome 7552
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
NNCGGTGTAGCTCAGTTGGTTAGAGCATACGGCTCATACCCGTAGTGTCCGGGGTTCGAA
ACCCTGCACCGCCACCA
Downstream region at tRNA end position 
aaatcaatga
Secondary structure (Cloverleaf model)
>WENV170019458	Met	CAT
                   n      ACCA aaatcaatga
                     N   C
                     N   C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          A A
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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