The detailed information of tRNA gene sequence


Sequence ID>WENV170019461
Genome IDBBPD01013591
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 413
End posion on genome 337
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttacttttgc
tRNA gene sequence 
GGGGATGTAGTGCAGCGGTCTAACGCGCTGGCCTGTCAAGCCAGAGAACGCGGGTTCGAA
TCCCGTCATCCCCGCCA
Downstream region at tRNA end position 
gttaaatcca
Secondary structure (Cloverleaf model)
>WENV170019461	Asp	GTC
                   c      GCCA gttaaatcca
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G C C C     A
      C G A        A      + | | | |     G
    G       C G T G       G C G G G     C
    G         | + |                 T T
    T       A C G C
      C T A        G     AGAAC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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