The detailed information of tRNA gene sequence


Sequence ID>WENV170019485
Genome IDBBPD01013883
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 623
End posion on genome 694
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctttacta
tRNA gene sequence 
TGAGAGGTTGAGTATCCGGTAACTCGTTAGGCTCATAATCTGAATAAGCGGGTTCGAGTC
CCGCTCTCTCCGttt
Downstream region at tRNA end position 
ttccaaaaaa
Secondary structure (Cloverleaf model)
>WENV170019485	Met	CAT
                   a      Gttt ttccaaaaaa
                     T   C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     C G C C C     A
      C T A        T      | | | | |     G
    C       T G A G       G C G G G     C
    G       | | | |                 T T
    G       A C T C
      T A          G     ATAA
                    T - A
                    T + G
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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