The detailed information of tRNA gene sequence


Sequence ID>WENV170019493
Genome IDBBPD01014237
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 704
End posion on genome 775
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
atttattgat
tRNA gene sequence
GGGCCGTTAGCATAGTGGCAGTGTATCCGGTTTGCATCCGGGAGGCGCGAGTTCGATTCT
CGCACGGTCCACag
Downstream region at tRNA end position
gcaatggcgg
Secondary structure (Cloverleaf model)
>WENV170019493	Ala	TGC
                   t      ACag gcaatggcgg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C G C T C     A
        G A        A      | | | | |     G
      T     T A C G       G C G A G     C
      G     + | | +                 T T
      G     G T G T
        C A        A     AGGC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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