The detailed information of tRNA gene sequence


Sequence ID>WENV170019494
Genome IDBBPD01014237
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1037
End posion on genome 1126
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatataaaat
tRNA gene sequence 
GGTGGGGTGGCTGAGCCCGGTTTAAGGCGCCGCACTCGAAATGCGGTATGCCCGAAAGGA
CATCGTGAGTTCAAATCTCACCCCCACCGCtt
Downstream region at tRNA end position 
taaaaactat
Secondary structure (Cloverleaf model)
>WENV170019494	Ser	CGA
                   t      GCtt taaaaactat
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
    C C G A        G      | | | | |     A
  C         G T C G       G T G A G     C
  G           + | |                 T T
  G         A G G C
    T T T A        G     TATGCCCGAAAGGACATC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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