The detailed information of tRNA gene sequence


Sequence ID>WENV170019507
Genome IDBBPD01015646
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3137
End posion on genome 3227
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttatttaccc
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTGATGGTGGCGGTCTTGAAAATCGCTGTGGCCTTACGGGTC
ACCGGGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
atatattttt
Secondary structure (Cloverleaf model)
>WENV170019507	Ser	TGA
                   c      GCCA atatattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C T       G G G G G     C
    G       + | |                   T T
    T       T G G T
      T G A        G     TGTGGCCTTACGGGTCACC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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