The detailed information of tRNA gene sequence


Sequence ID>WENV170019541
Genome IDBBPD01017770
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1535
End posion on genome 1630
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agattggcgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTAGGTCGAAGGCGATCGCCTGCTAAGCGATTATACGAGCTTTAAA
CTTGTATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
tgtatgcgcc
Secondary structure (Cloverleaf model)
>WENV170019541	Ser	GCT
                   c      GCCA tgtatgcgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    A T G A        G      | | | | |     G
  G         G C C G       G C G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TATACGAGCTTTAAACTTGTATC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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