The detailed information of tRNA gene sequence


Sequence ID>WENV170019543
Genome IDBBPD01017787
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 505
End posion on genome 429
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcaaaatac
tRNA gene sequence 
GGAGTGGTAGTTCAGCTGGTTAGAATGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAG
TCCCGTCCATTCCGCAA
Downstream region at tRNA end position 
tacaactttg
Secondary structure (Cloverleaf model)
>WENV170019543	Asp	GTC
                   c      GCAA tacaactttg
                     G - C
                     G - C
                     A - T
                     G + T
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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