The detailed information of tRNA gene sequence


Sequence ID>WENV170019559
Genome IDBBPD01018678
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2273
End posion on genome 2181
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttttttat
tRNA gene sequence 
GGAAAAGTGCCCGAGAGGACGAAGGGGACTTCCTGCTAAGAAGTTTTGGGGTCAAAAGCT
CCAACGAGGGTTCGAATCCCTCCTTTTCCGCCA
Downstream region at tRNA end position 
cgttacatga
Secondary structure (Cloverleaf model)
>WENV170019559	Ser	GCT
                   t      GCCA cgttacatga
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G A G G G     C
    G         | | |                 T T
    A       A G G G
      C G A        G     TTTGGGGTCAAAAGCTCCAAC
                    A - T
                    C - G
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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