The detailed information of tRNA gene sequence


Sequence ID>WENV170019560
Genome IDBBPD01018678
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2159
End posion on genome 2085
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tagagtgtct
tRNA gene sequence 
GGCTAGGTGACAGAATGGTGATGTGACGGTCTGCAAAACCGGTATATATGGGTTCGATTC
CCGTCCTAGCCTCCA
Downstream region at tRNA end position 
accaagaagg
Secondary structure (Cloverleaf model)
>WENV170019560	Cys	GCA
                   t      TCCA accaagaagg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     G - C
                     G - C          T T
                    T     T G C C C     A
        A A        G      | + | | |     G
      T     G A C A       A T G G G     C
      G       | | |                 T T
      G     A T G T
        T G        G     TATAT
                    A   G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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