The detailed information of tRNA gene sequence


Sequence ID>WENV170019578
Genome IDBBPD01019793
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 134
End posion on genome 45
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtttctctt
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGTTGAAGGCGACGGTCTTGAAAATCGTTGTAGGGGCAACTCTA
CCGTGAGTTCGAATCTCACCCCCTCCGCCA
Downstream region at tRNA end position 
gttttttctt
Secondary structure (Cloverleaf model)
>WENV170019578	Ser	TGA
                   t      GCCA gttttttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTAGGGGCAACTCTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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