The detailed information of tRNA gene sequence


Sequence ID>WENV170019582
Genome IDBBPD01020240
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 216
End posion on genome 142
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aatttagtca
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTCAAGACACTGGCCTTTCACGCCGGTAACGGGGGTTCAAATC
CCTCAGGGGTCACCA
Downstream region at tRNA end position 
agttatttag
Secondary structure (Cloverleaf model)
>WENV170019582	Glu	TTC
                   a      ACCA agttatttag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       A C T G       G G G G G     C
    G         | | |                 T T
    T       A G A C
      C A          A     TAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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