The detailed information of tRNA gene sequence


Sequence ID>WENV170019594
Genome IDBBPD01021754
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 127
End posion on genome 35
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgatttttat
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTTGAAGGCGCTCGCCTGGAAAGCGGGTATATGCTCAAAAAGT
GTATCGAGGGTTCGAATCCCTTCCTCTCTACGA
Downstream region at tRNA end position 
cttgtagtcc
Secondary structure (Cloverleaf model)
>WENV170019594	Ser	GGA
                   t      ACGA cttgtagtcc
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATATGCTCAAAAAGTGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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