The detailed information of tRNA gene sequence


Sequence ID>WENV170019613
Genome IDBBPD01024991
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 776
End posion on genome 853
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accaataaaT
tRNA gene sequence 
GCGGGCGTAGAGGAGTCTGGTCGTCCTCGGCTCCCTGTCACGGAGCAAATCGCCGGTTCA
AATCCGGTCGCCCGCGTaa
Downstream region at tRNA end position 
aattccgtaa
Secondary structure (Cloverleaf model)
>WENV170019613	Asp	GTC
                   T      GTaa aattccgtaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G G C C     A
    C T G A        A      + | | | |     A
  T         G G A G       G C C G G     C
  G         | | | |                 T T
  G         C C T C
    T C G T        G     AAATC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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