The detailed information of tRNA gene sequence


Sequence ID>WENV170019622
Genome IDBBPD01026183
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 555
End posion on genome 629
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cgccctcgac
tRNA gene sequence 
GGGCGATTAGCTCAATGGTAGAGCGCTTCGTTCACATCGAAGATGTCAGCGGTTCAAATC
CGTTATCGCCCACCA
Downstream region at tRNA end position 
tcccacccca
Secondary structure (Cloverleaf model)
>WENV170019622	Val	CAC
                   c      ACCA tcccacccca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T T G C C     A
        A A        A      | + | | |     A
      T     C T C G       A G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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