The detailed information of tRNA gene sequence


Sequence ID>WENV170019648
Genome IDBBPD01029070
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 412
End posion on genome 487
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
agtttatcat
tRNA gene sequence 
CGCGGAGTGGAGCAATTGGTAGCTCGTCGGGCTCATAACCCGAAGGTTATAGGTTCAAGT
CCTGTCTCCGCAACCA
Downstream region at tRNA end position 
tacatggccc
Secondary structure (Cloverleaf model)
>WENV170019648	Met	CAT
                   t      ACCA tacatggccc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        G      | + | | |     A
    T       C G A G       A T A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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