The detailed information of tRNA gene sequence


Sequence ID>WENV170019655
Genome IDBBPD01029372
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 744
End posion on genome 835
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttgcaccg
tRNA gene sequence 
GGAGAAATGGCAGAGTGGACGAATGCGGCGGTCTTGAAAACCGTTGTCTTGCTACCGCAG
GACCGGGGGTTCGAATCCCTCTTTCTCCGCAA
Downstream region at tRNA end position 
aaaacaatcg
Secondary structure (Cloverleaf model)
>WENV170019655	Ser	TGA
                   g      GCAA aaaacaatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    A       A T G C
      C G A        G     TGTCTTGCTACCGCAGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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