The detailed information of tRNA gene sequence


Sequence ID>ENV08002008
Genome IDABOK01361592
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 96
End posion on genome 23
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
nnnnnncgat
tRNA gene sequence 
TGCCCGATCCTCTAATGGTAAGAGAGCGGACTCTGACTCCGTCAATCAAGGTTCGAGTCC
TTGTCGGGCATCCA
Downstream region at tRNA end position 
gtttttttca
Secondary structure (Cloverleaf model)
>ENV08002008	Gln	CTG
                   t      TCCA gtttttttca
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     G T T C C     A
        A A        C      | | | | |     G
      T     T C T C       C A A G G     C
      G     | | | |                 T T
      G     A G A G
        T A        A     CAAT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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