The detailed information of tRNA gene sequence


Sequence ID>WENV170019675
Genome IDBBPD01034064
Search identical group
Phylum/Class[BBPD] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 548
End posion on genome 473
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tctgggcttt
tRNA gene sequence 
ACGGAAGTAGCTCAACTGGTAGAGTGGCGGTCTCCAAAACCGTAGGTTGCGGGTTCGATC
CCTGCCTTCCGTGCAA
Downstream region at tRNA end position 
gcaaattttc
Secondary structure (Cloverleaf model)
>WENV170019675	Trp	CCA
                   t      GCAA gcaaattttc
                     A - T
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          C T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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