The detailed information of tRNA gene sequence


Sequence ID>WENV170019695
Genome IDBBPE01000065
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 24914
End posion on genome 24822
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
gcacgcgtgt
tRNA gene sequence
GGACAGGTGTCCGAGCGGTTGAAGGAGCACGCCTGGAAAGTGTGTAAGCGGCTAAACCCC
GCTTCGCGGGTTCGAATCCCGCCCTGTCCGCCA
Downstream region at tRNA end position
cttcgaatgc
Secondary structure (Cloverleaf model)
>WENV170019695	Ser	GGA
                   t      GCCA cttcgaatgc
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TAAGCGGCTAAACCCCGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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