The detailed information of tRNA gene sequence


Sequence ID>WENV170019711
Genome IDBBPE01000177
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 22725
End posion on genome 22814
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggaaaaatct
tRNA gene sequence 
GGAAGCGTGGCCGAGTGGTTTAAGGCAGTGCTCTTGAAAAGCACCGATGCAGGAATGCAT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
gaggccgatt
Secondary structure (Cloverleaf model)
>WENV170019711	Ser	TGA
                   t      GCCA gaggccgatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGATGCAGGAATGCATCC
                    G - C
                    T - A
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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