The detailed information of tRNA gene sequence


Sequence ID>WENV170019751
Genome IDBBPE01000473
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4750
End posion on genome 4840
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttcgacagcc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTACACGGTTTCACCGT
GTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
aaatcaacaa
Secondary structure (Cloverleaf model)
>WENV170019751	Ser	CGA
                   c      GCCA aaatcaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TACACGGTTTCACCGTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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