The detailed information of tRNA gene sequence


Sequence ID>ENV08002009
Genome IDABOK01399365
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 86
End posion on genome 2
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gcgcctgcat
tRNA gene sequence 
GCGGATGTGGCGAAATTGGTAGACGCACCAGATTTAGGTTCTGGCGTAGCAATACGTGAA
GGTTCGAGTCCTTTCATCCGCACCA
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08002009	Leu	TAG
                   t      ACCA cnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       A G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGTAGCAATACGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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