The detailed information of tRNA gene sequence


Sequence ID>WENV170019831
Genome IDBBPE01000842
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 23670
End posion on genome 23759
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaactgcctc
tRNA gene sequence 
GGAGAGGTGGATGAGCGGTTTAAGTCGCACGCCTGGAAAGCGTGTGTGGGCTAATACCCA
CCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gaaatgacgc
Secondary structure (Cloverleaf model)
>WENV170019831	Ser	GGA
                   c      GCCA gaaatgacgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G T A G       G C G G G     C
    G         + | |                 T T
    T       A G T C
      T T A        G     TGTGGGCTAATACCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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