The detailed information of tRNA gene sequence


Sequence ID>WENV170019838
Genome IDBBPE01000936
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9442
End posion on genome 9366
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggtcttga
tRNA gene sequence 
CGCGGAGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAAGTTCAAA
TCTTGCCTCCGCAACCA
Downstream region at tRNA end position 
attaaaaagc
Secondary structure (Cloverleaf model)
>WENV170019838	Met	CAT
                   a      ACCA attaaaaagc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T T C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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