The detailed information of tRNA gene sequence


Sequence ID>WENV170019851
Genome IDBBPE01001052
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 20919
End posion on genome 20843
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gatatcatca
tRNA gene sequence 
GGGGTTGTAGCTCAGACGGTTAGAGTGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAT
CCCCGTCAACCCCGCCA
Downstream region at tRNA end position 
gaaaagcaaa
Secondary structure (Cloverleaf model)
>WENV170019851	Asp	GTC
                   a      GCCA gaaaagcaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C T
                    T     T G C C C     A
      A G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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