The detailed information of tRNA gene sequence


Sequence ID>WENV170019910
Genome IDBBPE01001375
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1097
End posion on genome 1005
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgagacttc
tRNA gene sequence 
GGAGCGATGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGGGGTGTAGAGCC
TCATCGAGGGTTCGAATCCCTCTCGCTCCGCCA
Downstream region at tRNA end position 
aataaaaaac
Secondary structure (Cloverleaf model)
>WENV170019910	Ser	GCT
                   c      GCCA aataaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGGGGTGTAGAGCCTCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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