The detailed information of tRNA gene sequence


Sequence ID>WENV170019913
Genome IDBBPE01001397
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5364
End posion on genome 5294
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aagttttgaa
tRNA gene sequence 
GGGCCTATAGCTTAATGGCAGAGCATTGCTTTCGCATAGCAGAGATATGGGTTCGATTCC
CATTAGGTCCAaaa
Downstream region at tRNA end position 
tttaggcggg
Secondary structure (Cloverleaf model)
>WENV170019913	Ala	CGC
                   a      Aaaa tttaggcggg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     A - T          T T
                    T     T A C C C     A
        A A        A      | | | | |     G
      T     T T C G       A T G G G     C
      G     + | | |                 T T
      G     G A G C
        C A        A     AGAT
                    T + G
                    T - A
                    G - C
                    C - G
                    T - A
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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