The detailed information of tRNA gene sequence


Sequence ID>WENV170019937
Genome IDBBPE01001645
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2243
End posion on genome 2168
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cttcgcgagg
tRNA gene sequence 
GGGTGCTTAGCTCAGTTGGTAGAGCGGCGCCCTTACAAGGCGTAGGTCGGCGGTTCGAGC
CCGTCAGCACCCACCA
Downstream region at tRNA end position 
ccctctgcga
Secondary structure (Cloverleaf model)
>WENV170019937	Val	TAC
                   g      ACCA ccctctgcga
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A          C G
                    T     C T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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