The detailed information of tRNA gene sequence


Sequence ID>WENV170019985
Genome IDBBPE01002114
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 14966
End posion on genome 15054
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atattttaaT
tRNA gene sequence 
AGGTGAATGGCTGAGTGGTTTAAAGCATTAGACTTGAAATCTAACATATAAATTTTTATA
TCGTGGGTTCGAATCCTACTTCACCTGTtt
Downstream region at tRNA end position 
aatagtttta
Secondary structure (Cloverleaf model)
>WENV170019985	Ser	TGA
                   T      GTtt aatagtttta
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T          T A
                    T     C A T C C     A
      T G A        G      | | + | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T T A        A     CATATAAATTTTTATATC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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