The detailed information of tRNA gene sequence


Sequence ID>WENV170019989
Genome IDBBPE01002114
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 23373
End posion on genome 23299
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttatattT
tRNA gene sequence 
AGGCTTATAGTTTAAGGGTTAAAACAAACCGCTCATAATGGTTGTATTATAGGTTCGAAT
CCTATTAAGCCTATtt
Downstream region at tRNA end position 
attatataat
Secondary structure (Cloverleaf model)
>WENV170019989	Met	CAT
                   T      ATtt attatataat
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     A - T          T A
                    T     T A T C C     A
      G A A        A      | | | | |     G
    G       T T T G       A T A G G     C
    G       | | | |                 T T
    T       A A A C
      T A          A     GTATT
                    A - T
                    A - T
                    C - G
                    C - G
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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