The detailed information of tRNA gene sequence


Sequence ID>WENV170019999
Genome IDBBPE01002137
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 200131
End posion on genome 200040
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcactaatat
tRNA gene sequence 
GGAAGTATGGCAGAGAGGCCGATCGCAGGAGTTTGCTAAACTTCAGACCCGCGAAAGTGG
GTCCGGGGGTTCGAATCCCTCTACTTCCGCCA
Downstream region at tRNA end position 
aaatttgggt
Secondary structure (Cloverleaf model)
>WENV170019999	Ser	GCT
                   t      GCCA aaatttgggt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    C       T C G C
      C G A        A     AGACCCGCGAAAGTGGGTCC
                    G - C
                    G + T
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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