The detailed information of tRNA gene sequence


Sequence ID>WENV170020030
Genome IDBBPE01002211
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5469
End posion on genome 5545
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cactcggcac
tRNA gene sequence 
CGGAGTGTAGCTCAGCCTGGTAGAGCACTGTGTTCGGGACGCAGGGGCCGGAGGTTCGAA
TCCTCTCACTCCGACCA
Downstream region at tRNA end position 
gcgccgatgt
Secondary structure (Cloverleaf model)
>WENV170020030	Pro	CGG
                   c      ACCA gcgccgatgt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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