The detailed information of tRNA gene sequence


Sequence ID>WENV170020051
Genome IDBBPE01002482
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 10229
End posion on genome 10304
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnncggc
tRNA gene sequence 
GCCCAGGTAGCTCAGTTGGTAGAGCATGCGACTGAAAATCGCAGTGTCGGTGGTTCGATT
CCGCCCCTGGGCACCA
Downstream region at tRNA end position 
tcgcatcggg
Secondary structure (Cloverleaf model)
>WENV170020051	Phe	GAA
                   c      ACCA tcgcatcggg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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