The detailed information of tRNA gene sequence


Sequence ID>WENV170020053
Genome IDBBPE01002524
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5929
End posion on genome 5854
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cgcgttcccc
tRNA gene sequence 
GAGCCCGTAGCTCAGTTGGTAGAGCACGTGACTTTTAATCATGGGGTCCTGGGTTCGAGT
CCCAGCGGGCTCACCA
Downstream region at tRNA end position 
ccgccttcgc
Secondary structure (Cloverleaf model)
>WENV170020053	Lys	TTT
                   c      ACCA ccgccttcgc
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G + T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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