The detailed information of tRNA gene sequence


Sequence ID>WENV170020064
Genome IDBBPE01002603
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5138
End posion on genome 5224
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cggcacccat
tRNA gene sequence 
GCGCGGGTGGCGAAATGGGTAGACGCACCAGGTTTAGGTCCTGACGCCAGCGATGGTGTG
GGGGTTCGAGTCCCCCCCCGCGCACCA
Downstream region at tRNA end position 
gccgacgaga
Secondary structure (Cloverleaf model)
>WENV170020064	Leu	TAG
                   t      ACCA gccgacgaga
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     G
    G       A G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCAGCGATGGTGT
                    C   A
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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