The detailed information of tRNA gene sequence


Sequence ID>WENV170020068
Genome IDBBPE01002756
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5293
End posion on genome 5369
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgcctcggtc
tRNA gene sequence 
CGGGGAATAGCTCAGCCTGGTAGAGCACTGTCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTTTCCCCGACCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020068	Pro	CGG
                   c      ACCA tnnnnnnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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