The detailed information of tRNA gene sequence


Sequence ID>WENV170020100
Genome IDBBPE01002910
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4144
End posion on genome 4069
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtttccctag
tRNA gene sequence 
GGTCCGTTGGCCGAGTGGCGAGGCTCGGGACTGCAAATCCCGTATGACGGCGGTTCGATT
CCGCCACGGACCTCCA
Downstream region at tRNA end position 
agttcatggg
Secondary structure (Cloverleaf model)
>WENV170020100	Cys	GCA
                   g      TCCA agttcatggg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C C G C C     A
        G A        G      | | | | |     G
      T     G C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        C G        T     TATGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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