The detailed information of tRNA gene sequence


Sequence ID>WENV170020101
Genome IDBBPE01002910
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4002
End posion on genome 3928
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgacgttttc
tRNA gene sequence 
GCGCGGGTCGTTCAAGGGCCAGGACAGCGGTCTCCAAAACCGCCGATGGGAGTTCGAGTC
TCCCCCCGCGTGCCA
Downstream region at tRNA end position 
gtcctgccag
Secondary structure (Cloverleaf model)
>WENV170020101	Trp	CCA
                   c      GCCA gtcctgccag
                     G + T
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C C C T C     A
      G A A        C      | | | | |     G
    G       C T T G       G G G A G     C
    G       | + | |                 T T
    C       G G A C
      C A          A     CGAT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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