The detailed information of tRNA gene sequence


Sequence ID>WENV170020116
Genome IDBBPE01003041
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1296
End posion on genome 1393
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gactctttat
tRNA gene sequence 
GGAAGTGGAAAGGGTACTGGTGGCCCTCCCGGACTTCAAATCCGGCGCACCGGGTTAACA
GCTTGGTGGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tctcttcttt
Secondary structure (Cloverleaf model)
>WENV170020116	SeC(p)	TCA
                   t      GCCA tctcttcttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      C A T        A      + | | | |     G
    T       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G G        C     CGCACCGGGTTAACAGCTTGGTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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