The detailed information of tRNA gene sequence


Sequence ID>WENV170020121
Genome IDBBPE01003135
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 17473
End posion on genome 17399
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
aagcgcgagg
tRNA gene sequence 
GCCGGCTTAGCTCAGAGGTAGAGCAACTGATTCGTAATCAGTAGGTCCGGGGTTCGATTC
CCCGAGCCGGCACCA
Downstream region at tRNA end position 
cccgggctca
Secondary structure (Cloverleaf model)
>WENV170020121	Thr	CGT
                   g      ACCA cccgggctca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T T
                    T     G C C C C     A
        G A        A      | | | | |     G
      A     C T C G       C G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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