The detailed information of tRNA gene sequence


Sequence ID>WENV170020124
Genome IDBBPE01003157
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1724
End posion on genome 1813
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcgcagccgt
tRNA gene sequence 
GGAAGCGTGGCAGAGTGGTCGATTGCACCGGTCTTGAAAACCGGCAACGGGGTCACCCGT
TCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aataccaatc
Secondary structure (Cloverleaf model)
>WENV170020124	Ser	TGA
                   t      GCCA aataccaatc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        A     CAACGGGGTCACCCGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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