The detailed information of tRNA gene sequence


Sequence ID>WENV170020127
Genome IDBBPE01003183
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 655
End posion on genome 579
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gacgacatgt
tRNA gene sequence 
CGGGGAGTGGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
ttttcttttc
Secondary structure (Cloverleaf model)
>WENV170020127	Pro	TGG
                   t      ACCA ttttcttttc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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