The detailed information of tRNA gene sequence


Sequence ID>WENV170020141
Genome IDBBPE01003312
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1552
End posion on genome 1625
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcagcctat
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTAGAGCAGGAGACTCATAATCTCTTGGTCGTAGGTTCGAGT
CCTACAGGGCCCACtt
Downstream region at tRNA end position 
ttataaagtt
Secondary structure (Cloverleaf model)
>WENV170020141	Met	CAT
                   t      ACtt ttataaagtt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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