The detailed information of tRNA gene sequence


Sequence ID>WENV170020142
Genome IDBBPE01003332
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3931
End posion on genome 3856
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
atattgattt
tRNA gene sequence 
GCCCCGTTAGCTCAGTTGGTAGAGCAACTCCCTTTTAAGGAGAGGGTCGGGGGTTCGAAT
CCCTCACGGGGTACAA
Downstream region at tRNA end position 
cgcgttataa
Secondary structure (Cloverleaf model)
>WENV170020142	Lys	TTT
                   t      ACAA cgcgttataa
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    A   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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