The detailed information of tRNA gene sequence


Sequence ID>WENV170020143
Genome IDBBPE01003346
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 1530
End posion on genome 1606
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position
atatcaatat
tRNA gene sequence
GCACCCGTAGCTCAGGAGGAAAGAGCAGCGGTTTCCTAAACCGTTTGCCGGGAGTTCGAG
TCTCTCCGGGTGCGCCA
Downstream region at tRNA end position
tcatttattt
Secondary structure (Cloverleaf model)
>WENV170020143	Arg	CCT
                   t      GCCA tcatttattt
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T C T C     A
      G G A        A      | + | | |     G
    A       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      A A A        A     TTGCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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